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aarusiva
aarusiva
Last Activity: Nov 10 '08, 06:31 AM
Joined: Oct 29 '08
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  • aarusiva
    replied to problem with for loop
    in Perl
    Code:
    for($i=1;$i<=$no;$i++)
    {
      for($j=0;$j<=15;$j++)
        {
           my @lprobes;
           my %sl;
    
           my $geneid = $gene[$i][$j];
           if($geneid eq "") { next };
           and Display things 
         }
    }
    same like only the param loop also but there is no problem in param loop.......
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    Last edited by numberwhun; Nov 5 '08, 04:57 PM. Reason: Please use code tags

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  • aarusiva
    started a topic problem with for loop
    in Perl

    problem with for loop

    Hi everybody


    In my codes i am using two for loop (nested one) . i am taking values through param in that file but the loop is not creating problem for ten cyle but from 11 its giving problem its spliting 11 as double 1 and giving the result for file 1 ... how to clear this ...


    thank you in advance....
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  • aarusiva
    replied to Bio::SeqIO module in for loop
    in Perl
    Thank you nithin
    nithinpes ..

    Thanks for your responce towords my doubt i am trying the url which you have mentioned here .......
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  • aarusiva
    replied to Bio::SeqIO module in for loop
    in Perl
    hi ...

    sorry i can't show fill part of my code ,but my code looks like below one ...
    Code:
    for($i=1;$i<=$no;$++)
    {
    my $filename = $session[$i].".txt";
            my $seqobj = Bio::SeqIO->new( -format => 'GenBank',-file => $filename);
            my $seq=$seqobj->next_seq();
    ....
    
    etc...
    }
    thank you.....
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    Last edited by numberwhun; Oct 30 '08, 12:43 PM. Reason: Please use code tags

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  • aarusiva
    started a topic Bio::SeqIO module in for loop
    in Perl

    Bio::SeqIO module in for loop

    Hi friends ...

    Actually i am a beginner in perl i am using Bio::seqIO module for genbank file in a for loop, if the condition is below or equal to 10 (ten) the result is proper .. but when its crosses the limit 10 its not working properly its taking previous files sequence and next files limits to splice...

    there is any limitations in that module ?

    please help me friends

    regards and thanks...
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