new user needs help!

Collapse
This topic is closed.
X
X
 
  • Time
  • Show
Clear All
new posts
  • drjekil

    new user needs help!


    I am totally new in biopython and its my first program.so may be i am asking
    stupid question.
    I am working with a text filelooks like this:
    #NAME AA TOPO ACCESS DSSP STRIDE Z-COORD
    1lghB A i 79.8 H H -24.58
    1lghB V i 79.6 H H -22.06
    1lghB H i 71.9 H H -19.94
    i need to compare those lines which has a Z-COORED value between 10 to 22
    and presents in the following way
    True/false A C D E F G H I K L M N P Q R S T V X Y W(here alfabets
    represents amino acids)
    1 1:1 2:0 3:0 and so on for rest of the amino acids.
    IF PRESENT IN THAT RANGE
    IF not PRESENT IN THAT RANGE then
    -1 1:0 2:0 so on,it should be 1 instead of 0 when it will find corresponding
    amino acid for that line.say here,for 2nd line it will be 16:1.
    true will represent 1,false -1.
    i have to cheek all the lins in the file and print it.
    u have to tell simply otherwise i cant understand even,so stupid am i!
    I will be really greatful!Thanks in advance
    --
    View this message in context: http://www.nabble.com/new--user-need...p16571823.html
    Sent from the Python - python-list mailing list archive at Nabble.com.

Working...